PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_022080-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family C2H2
Protein Properties Length: 429aa    MW: 46694.4 Da    PI: 9.3605
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_022080-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.6e-05196218223
                    EETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                    +C++Cg+ F  +++L+ H  + H
  NNU_022080-RA 196 TCHKCGEQFGKWETLEAHHLSkH 218
                    7*****************99877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280197218IPR007087Zinc finger, C2H2
SuperFamilySSF563996.47E-22220428No hitNo description
Gene3DG3DSA:3.90.228.102.2E-8228423IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MPTVWFVLKR SLHCKSEPSD VHDPKARSHL STFLTRKTGR SGCSRSIANL KDVIHGSKRH  60
LEKPPSCSPR SIGSSEFLNP ITHEVILSNS TCELKITGFG GLHEVAGGGL GGDGSTFVGT  120
LRPGTPGPGG HHTMHYYNPS LKSSATPPRK SPGFLSDRGG SIFGGSAIFG GGDGGGIPSN  180
PRTSHEVDSH GSSTVTCHKC GEQFGKWETL EAHHLSKHAV TELVEGDSSR KIVEIICRTS  240
WLKSENNCGR IERVLKVHNM QKTLARFEEY REMVKMKASK LPKKHPRCLA DGNELLRFYG  300
TTVACSLGMN GSSNLCMLEK CSVCRIIRHG FSTKKELKGG IGVFTTSTSG RAFESIQLYE  360
DDPSVKKALI VCRVIAGRVH RPLENFQELA GQTGFDSLAG KVGLYSNIEE LYLLNPRALL  420
PCFVVICRH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010241023.10.0PREDICTED: uncharacterized protein LOC104585747
TrEMBLW1NR640.0W1NR64_AMBTC; Uncharacterized protein
STRINGGLYMA06G41530.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-129C2H2 family protein